Courses
Digital Ecology and Biosurveillance
Master of Science
Course Details
| Course Code | SG_SDIGE_M09 |
|---|---|
| Level | 9 |
| Duration | 1 year |
| Credits | 90 |
| Method of Delivery | On-campus |
| Campus Locations | Sligo |
| Mode of Delivery | Full Time |
Course Overview
This programme will equip students with the skills needed to develop a career in the emerging fields of digital ecology and biosurveillance. The programme content will focus on AI-assisted SMART sensing and environmental modelling, molecular ecology and biodiversity assessments using classic morphotaxonomic approaches and novel eDNA-based methodologies.
The programme has been developed to provide a comprehensive research-based education and practical training in eDNA and applied IT technological solutions for modern environmental sciences. Graduates will emerge equipped with the practical skills, strategic mindset and innovative tools necessary to address the evolving needs of a new generation of professional practitioners within the environmental science, ecology and biological conservation sectors.
Course Details
Year 1
| Semester | Module Details | Credits | Mandatory / Elective |
|---|---|---|---|
| 1 |
Environmental Modelling ConceptsThis module introduces students to the principles and applications of environmental modelling. It covers fundamental modelling concepts, including data handling, analysis, processing, basic model development and evaluation. The teaching approach emphasises theoretical knowledge, data analysis and practical computer-based lab work using GIS and popular programming languages and environments for modelling (eg. R, Python). Real-world datasets relevant to different types of ecosystems will be utilised to address challenges and assess environmental processes. Through a blend of theory and practical exercises, students will develop essential modelling skills to help manage ecosystems, which is crucial for environmental management relating to sustainability and climate change mitigation. Learning Outcomes 1. Critically describe and evaluate fundamental environmental modelling concepts and their significance in ecosystem management, sustainable land use and/or climate change mitigation. |
05 | Mandatory |
| 1 |
Machine Learning Powered Geospatial AnalysesThis module introduces Machine Learning (ML)-powered geospatial analyses to enhance natural resource and ecosystem service management, with a focus on practical Geographic Information System (GIS) applications. Learners will gain theoretical knowledge and applied computer skills to utilise ML-driven geospatial approaches with a focus on the environmental sector. Topics include GIS and basic Remote Sensing (RS) concepts for classification applications, geospatial analyses, mapping complex geospatial data, and classifications with integrated application of ML-powered geospatial analysis toolkits/plugins, including relevant basic modelling approaches. Learning Outcomes 1. Critically evaluate essential GIS concepts and their role in managing, analysing and visualising spatial data for environmental management applications. |
05 | Mandatory |
| 1 |
Environmental Smart Sensing and Internet of ThingsThis module introduces students to the concepts of SMART sensing and the Internet of Things (IoT) in environmental monitoring and management. It focuses on integrating advanced sensing technologies with IoT solutions to effectively monitor and manage environmental resources, providing a data-supported framework for decision-making and sustainability. The course emphasises theoretical knowledge, principles of measurement, monitoring needs and sensor selection, data analysis and practical-based work for data gathering and processing. Additionally, the module incorporates modelling elements and system design principles to enhance the learners' understanding and application of smart sensing technologies. Students will develop foundational skills to analyse, interpret and critically evaluate data from smart sensors, and to design and assess IoT-enabled environmental monitoring systems that support informed and sustainable decision-making. Learning Outcomes 1. Compare and critically discuss the basic principles of IoT architecture and SMART sensing and their significance for environmental management. |
05 | Mandatory |
| 1 |
Molecular Ecology and eDNA AnalysisThis module will introduce students to the principles underpinning molecular ecology and practical components of biomolecular methodologies which apply to environmental sciences. Basic and advanced PCR-based methods will be applied in the laboratory using samples collected from both aquatic and terrestrial matrices. Focus will also be placed on the use of real-time PCR protocols for the detection, identification and quantification of specific microorganisms and the application of metabarcoding protocols for community structure assessments. Case studies will be reviewed through interactive workshops, familiarising the learners with state-of-the-art approaches used for applied molecular ecology and biosurveillance for community diversity analyses and their implications for conservation initiatives. Learning Outcomes 1. Assess and evaluate the main principles underpinning advanced DNA-based analyses in the context of their suitability for specific molecular ecology and biosurveillance applications. |
05 | Mandatory |
| 1 |
Biodiversity Assessment and MonitoringThis module will equip the students with the morphotaxonomic skills needed to identify key biological species whose presence is used as a proxy to determine the ecological quality status of specific natural habitats. Field surveys will be undertaken to collect a variety of biological specimens (e.g. protists, flora, fauna) found in aquatic and terrestrial ecosystems. Samples will be examined in the laboratory through the use of specialist taxonomic keys and microscopy analysis for morphometric measurements. Complementary DNA-based protocols will be used to reinforce the identification diagnoses (e.g. based on mitochondrial gene fragment sequencing). Case studies will be reviewed through interactive workshops, offering the students relevant practical insights on the conduct of community diversity assessments for applied ecological management, conservation and biosurveillance initiatives. Learning Outcomes 1. Integrate ecological field sampling design and strategies aimed at surveying biodiversity in a range of aquatic and terrestrial environments. |
05 | Mandatory |
| 1 |
Research Methods for Environmental ScienceThis module requires the learner to develop research competencies aligned with cognisant topics in environmental science, integrating elements of research methodologies and articulating core thematics into the development of a specific research proposal. The module will equip students with a range of theoretical insights and practical skills necessary for good research practice. This activity encourages innovation and exploratory learning, laying the foundations for the subsequent module Research Project. This unit of learning exposes students to the application of research methodologies with the view to developing independent self-learning, critical thinking and analytical skills. The formal requirements of a dissertation will be outlined in order to prepare the student for the process of writing a MSc research thesis. Learning Outcomes 1. Appraise the steps involved in a research process and select and implement relevant research methodologies. |
05 | Mandatory |
| 2 |
Bioinvasions Monitoring and ManagementThis module introduces the students to the risks posed by alien invasive species (IAS) in relation to environmental quality and health aspects. A number of both aquatic and terrestrial key case studies relevant to the Irish, European and international contexts will be reviewed and discussed within the framework of emerging regulatory initiatives developed to better monitor and sustainably manage biological invasions in ecosystems at risk. Field sampling considerations and the incorporation of emerging eDNA-based technologies into IAS-targeting monitoring and research initiatives will be integrated in the case studies reviewed within interactive workshops, thereby equipping the learner with state-of-the-art know-how to deal with bioinvasion scenarios. Learning Outcomes 1. Evaluate key policy drivers relevant at national and international levels to the monitoring and management of bioinvasions in both aquatic and terrestrial environments. |
05 | Mandatory |
| 2 |
Research Data ProcessingThis module introduces students to core data analysis principles and practices tailored to environmental science applications. It provides foundational skills in data processing, statistical analysis and interpretation using popular programming languages and statistical software (eg. R, Python, SPSS), supporting the analytical needs applicable to evidence-based practice and impactful environmental research. Students will explore research methodologies, statistical tools and critical appraisal techniques, preparing them to design and implement robust research projects. Through a blend of theoretical and practical learning, students will learn to manage, visualise and analyse environmental datasets so as to address contemporary challenges in environmental sciences. Learning Outcomes 1. Critically evaluate research methodologies relevant to environmental sciences, demonstrating the ability to describe key concepts in data analysis (data types, sampling, statistical distributions…). |
05 | Mandatory |
| 2 |
Research Project in Environmental ScienceLearners will undertake an approved research project under the direction of an internal academic supervisor (with, where applicable, scope for collaboration with some of the various external stakeholders of the programme) using knowledge skills and competencies acquired at earlier stages of the Master's Programme. Students will further develop the knowledge and competencies associated with successfully developing and implementing a research plan. Learners will execute a research proposal using appropriate methodologies, analyse data, evaluate findings, infer conclusions, demonstrating self-direction and originality of thought. As such, the students will further augment their capacity to adequately manage research planning, timelines, delivery and communication. The learner will submit a thesis in the form of a scientific paper aligned with the format of an original research article drafted for submission to an internationally peer-reviewed journal. Critical thinking skills will be further honed through the analysis of research data and the presentation of research findings in the format of thesis, conference-style poster, presentation and viva voce. Learning Outcomes 1. Construct an independent research project within a structured supervision framework. |
50 | Mandatory |
Recommended Study Hours per week
In semester 2 (dominated by research project), 8.5 weekly contact hours and 33.5 hours of independent learning.
Examination and Assessment
examination element. A balanced approach to assessment is scaffolded in the programme, with data mining and analysis, simulation outputs, oral/poster presentations, reference searching, case study debates, practical skills demonstration, portfolio of work, project thesis and final examination.
On-Campus Attendance Requirement
Progression
A range of further study opportunities are available to graduates of this programme at levels 9 and 10.
Download a prospectus
Entry Requirements
Candidates must hold a cognate Level 8 Bachelor (Honours) degree in areas such as environmental science, ecology and conservation, agriculture and forestry, botany, zoology and marine biology, with a minimum grade classification of H2.2 or equivalent.
Interviews with prospective candidates will be organised, as necessary, on an ad-hoc basis.
Careers
Graduates of this programme will have access to a growing range of career opportunities across research, industry, government, and conservation sectors. The demand for professionals with digital ecology and biosurveillance skills is increasing as the methods become standard tools for biodiversity assessment and environmental monitoring.
The range of career opportunities includes:
Research Scientist/Technician
Environmental Consultant
Conservation and Wildlife Biologist
Project or Programme Coordinator
Government and Regulatory Roles
Academic and Teaching Positions
Emerging and Niche Roles:
Field Technician – Conduct eDNA sampling in aquatic or terrestrial environments, often in remote or challenging locations.
Bioinformatics Specialist – Analyse large eDNA datasets, develop analytical pipelines, and interpret results for research or industry clients.
Science Communication and Policy – Translate eDNA research findings for policymakers, the public, or media, or contribute to the development of environmental monitoring standards and guidelines.
Technical Director – Ecology: Leading ecology teams, managing ecology inputs to large projects, requiring expertise in ecology and environmental science.
GIS Officer/Technician: Using Geographic Information Systems (GIS) to analyze spatial biodiversity and ecological data for conservation and management.
Biodiversity Data Technician: Collecting and analyzing biodiversity data, supporting local conservation priorities using digital data platforms.
Environmental Technician: Monitoring environment data including habitat conditions, species populations, and ecosystem health with digital tools.
Remote Sensing Analyst: Interpreting digital remote sensing data for ecosystem monitoring, habitat mapping, and environmental assessments
Further Information
Application Closing Date
Start Date
Who Should Apply?
Demand for this programme is expected to come from three distinct groups:
Undergraduates looking to complete a postgraduate qualification in this specialist area
Science professionals looking to develop skills in this specialist area
Science professionals who are already working in the ecology and biosurveillance area and seeking to acquire new skills
Contact Information
Dr Nicolas Touzet
Environmental Science